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Chromosome-level Genome Assembly of Stem Borer Batocera Rufomaculata Using Pacbio Hifi and Hi-c Sequencing
论文题目: Chromosome-level Genome Assembly of Stem Borer Batocera Rufomaculata Using Pacbio Hifi and Hi-c Sequencing
作者: He, Jinwu; Bai, Tianqi; Wan, Wenting; Dong, Zhiwei; Wang, Yangjie; Zhang, Hongrui; Li, Xueyan
联系作者: [email protected]
发表年度: 2025
DOI: DOI:10.1038/s41597-025-05463-1
摘要:

Batocera rufomaculata (Cerambycidae: Lamiinae), a prominent representative of longhorned beetles, is a globally significant stem-boring pest, infesting over 50 species of deciduous trees. Despite its substantial ecological and economic impact, the genomic basis underlying its host adaptation remain poorly understood. Here, we present a chromosome-level genome assembly of B. rufomaculata, constructed using a combination of Illumina, PacBio HiFi, and Hi-C sequencing data. The genome spans 338.08 Mb, with a scaffold N50 of 37.00 Mb, and is organized into 10 pseudo-chromosomes, including a chromosome X validated by genome collinearity and sequencing depth analyses. Repetitive elements constitute 27.89% of the genome, totaling 94.29 Mb. Out of 17,887 predicted genes, 12,729 were functionally annotated with at least one supporting evidence. The high-quality genome assembly and annotation were confirmed by multiple metrics, including genome size, reads mapping rate (>99.5%), BUSCO completeness (>97.1%), and collinearity analyses. This comprehensive genomic resource provides a foundation for investigating the ecological adaptation of B. rufomaculata and offers valuable insights into the genetic mechanisms that could inform pest management strategies.

刊物名称: Scientific Data
论文出处: https://www.nature.com/articles/s41597-025-05463-1
影响因子: 7.2(2025JIF)
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